Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943152.1_cds_XP_016486406.1_77247
CDS Infomation

[gene=LOC107806704] [db_xref=GeneID:107806704] [protein=ankyrin repeat-containing protein At3g12360-like isoform X3] [protein_id=XP_016486406.1] [location=join(2131..2197,2278..2769,3453..3614,5551..5604,6979..7421,8404..9018)] [gbkey=CDS]
Sequence

ATGTCGTCCTTACCAAATCTAGCAGCGAACACAAGCAACAATAATGTTCACCAATCGCCC
AGTCCCGGCAGAAGCGAGAAGGATCAGTTGTGGAGATGCTTGCCCTTATACCGTGCATTA
CTCAGAGGCGACCAATGTGATCTTGAGCTAGCTGCTCGACCTCTGGGGCCCCTATACAAA
GCCTGGGATTGTAAGATAACAAGAGCTGGGGACACCACCCTTCATGTAATTGTTGGTGCG
GGAAAGTGGTTTGATGATCCGACTGTGGGTCCATCAGCTTACACTTCGCGTAACAATGAT
GGGCACACACCTCTTTGTGTGGCTGCAATGGTTGGGAACATGGATGCAGCAAAGAATTTG
CTGCAACTCAACCCGGGAATGGGATCTCTTGATGATGCTGTTGGGCCACATCCAATCATA
GAGGCTGCTAGGTATGGCCATAAGGAGATGGTTTTACTTTTGATTGGGGATATGGAAAGG
AAGTTGGGAGGCTCCCCACCAACTAAACAATCGAGTGCTTCCCACTTTCTCCATCTTCTA
GTATTGGCTGGATTCTATGATGTGCTGCTAGCTCTGCTAAGACGTCATCCTGGTTTGGCC
CGAACAGAGTTTTATGGTGACAATAACGAATCCCTTTTGAGCTTGCTGGCTGAAATACCT
TCTGCATTTCGGAGTGGGACTCGACTAAGATTCTGGCACTGGCAGCAGTTACTTTATTCA
GGGATCATGATGAAGTCAATGATTCGTGCCACTCGCGAAATTTGGAAAACAACAACAAGA
GCAATCAGACACATTAAGGATACAAAATTAATGCATGAAGAGACTCTTGATATTGTGAAA
CGTCTTTGCGAGGAACTTACCAAACATTATTCCTCTACGGGTGAGGATATTGAGCCAGTA
CTTAGAAAGGCACTTCTTTCAGCAGCAGGTTCAGGAATTTCTGAAATCATAGAAGAAATT
ATAGAACGTTACCCAGACGCAATCTGGTTTGTTGATTCTGAGAACCATAACTTATTTCAC
CTTGCAGTAATAAATCGTTATGAGAAGGTGTTTAGTCTTATATATCAGTTAAGTGTATAT
AAACATTTGGTAACAGCTGGTGAAGACACTTCAGGGAATAACATATTACATATGGCTGGA
AAGCTAGCACCTCTTAGCCGACTCAATCTTATCTCAGGTGCGGCTTTGCAAATGCAGCGT
GAATTGCAATGGTTTCAGGAAGTGGAAAAGTTTGTTCAACCAACGCTCAGAACAAAGAGA
AACTCAAATGGAAAAACTCCAAAAATGGTGTTTACTGAGGAACACAAGGAGTTGGTCAAA
GAAGGAGAGAAATGGATGAAAGAAACTGCAAATTCCTGTATATTTGTGGCATCCCTAACA
ACAACAGTAGTATTTGCAGCAGCCATTACCGTGCCAGGTGGAAACAATCAAAACAGTGGT
TTTCCACTCTTCTCCAACGAAACTGCTTTCACGACTTTTGCAGTTTCTGCTGCATTCTGT
CTGTTCTCTTCTGTTGCCTCTGTTCTAATGTTCCTGTCTATCCTCACCTCGAGATATGCA
GAGGGGGATTTCCTAAGACGTCTTCCGAAGAGATTGATTCTAGGCCTGGGTACCCTATTC
ATTTCAATGACATCTCTGATGATAGCATTTAGTGCTACAATTTATCTCGTTTTTGGTCAG
AAAAAGGGATGGATACTTATTCCAGTGGGCATAGCAGCCCTCATTCCAGTAATCCTCTTC
GAGTCCTTGCAATTTCCTCTCTTACTGGATATGTTTATGTCCACTTATGGTCCAAGCATT
TTTCGCAAACAGAGCTCACGTATACTTCACTAG

Peptide Sequence

PEP ID

XP_016486406.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X3 [Nicotiana tabacum]
Sequence

MSSLPNLAANTSNNNVHQSPSPGRSEKDQLWRCLPLYRALLRGDQCDLELAARPLGPLYK
AWDCKITRAGDTTLHVIVGAGKWFDDPTVGPSAYTSRNNDGHTPLCVAAMVGNMDAAKNL
LQLNPGMGSLDDAVGPHPIIEAARYGHKEMVLLLIGDMERKLGGSPPTKQSSASHFLHLL
VLAGFYDVLLALLRRHPGLARTEFYGDNNESLLSLLAEIPSAFRSGTRLRFWHWQQLLYS
GIMMKSMIRATREIWKTTTRAIRHIKDTKLMHEETLDIVKRLCEELTKHYSSTGEDIEPV
LRKALLSAAGSGISEIIEEIIERYPDAIWFVDSENHNLFHLAVINRYEKVFSLIYQLSVY
KHLVTAGEDTSGNNILHMAGKLAPLSRLNLISGAALQMQRELQWFQEVEKFVQPTLRTKR
NSNGKTPKMVFTEEHKELVKEGEKWMKETANSCIFVASLTTTVVFAAAITVPGGNNQNSG
FPLFSNETAFTTFAVSAAFCLFSSVASVLMFLSILTSRYAEGDFLRRLPKRLILGLGTLF
ISMTSLMIAFSATIYLVFGQKKGWILIPVGIAALIPVILFESLQFPLLLDMFMSTYGPSI
FRKQSSRILH

Transcript Sequence

Gene sequence data has not been registered.